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1

Immune awakening revealed by peripheral T cell dynamics after one cycle of immunotherapy

Valpione, Sara, Galvani, Elena, Tweedy, Joshua, Mundra, Piyushkumar A., Banyard, Antonia, Middlehurst, Philippa, Barry, Jeff, Mills, Sarah, Salih, Zena, Weightman, John, Gupta, Avinash, Gremel, Gabrie

Journal:

Year:

2020

File:

PDF, 12.66 MB

2020

2

Application of response surface methodology to cell immobilization for the production of palatinose

Piyushkumar Mundra, Kiran Desai, S.S. Lele

Journal:

Bioresource Technology

Year:

2007

Language:

english

File:

PDF, 341 KB

english, 2007

3

Stability of building gene regulatory networks with sparse autoregressive models

Jagath C Rajapakse, Piyushkumar A Mundra

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 265 KB

english, 2011

4

Using pseudo amino acid composition to predict protein subnuclear localization: Approached with PSSM

Piyushkumar Mundra, Madhan Kumar, K. Krishna Kumar, Valadi K. Jayaraman, Bhaskar D. Kulkarni

Journal:

Pattern Recognition Letters

Year:

2007

Language:

english

File:

PDF, 146 KB

english, 2007

5

Gene and sample selection for cancer classification with support vectors based t-statistic

Piyushkumar A. Mundra, Jagath C. Rajapakse

Journal:

Year:

2010

Language:

english

File:

PDF, 258 KB

english, 2010

6

[IEEE 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Montreal, QC, Canada (2010.05.2-2010.05.5)] 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology - Support vectors based correlation coefficient for gene and sample selection in cancer classification

Mundra, Piyushkumar A., Rajapakse, Jagath C.

Year:

2010

Language:

english

File:

PDF, 356 KB

english, 2010

7

Using Recurrence Quantification Analysis Descriptors for Protein Sequence Classification with Support Vector Machines

Mitra, Joydeep, Mundra, Piyushkumar, Kulkarni, B. D., Jayaraman, Valadi K.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2007

Language:

english

File:

PDF, 732 KB

english, 2007

8

Multiclass Gene Selection Using Pareto-Fronts

Rajapakse, Jagath C., Mundra, Piyushkumar A.

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2013

Language:

english

File:

PDF, 1.63 MB

english, 2013

9

[IEEE 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Singapore, Singapore (2013.04.16-2013.04.19)] 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) - Integrating epigenetic prior in dynamic Bayesian network for gene regulatory network inference

Chen, Haifen, Maduranga, D. A. K., Mundra, Piyushkumar A, Zheng, Jie

Year:

2013

Language:

english

File:

PDF, 416 KB

english, 2013

10

The prediction of type 2 diabetes in women with previous gestational diabetes mellitus using lipidomics

Lappas, Martha, Mundra, Piyushkumar A., Wong, Gerard, Huynh, Kevin, Jinks, Debra, Georgiou, Harry M., Permezel, Michael, Meikle, Peter J.

Journal:

Year:

2015

Language:

english

File:

PDF, 211 KB

english, 2015

11

Gene and sample selection using T-score with sample selection

Mundra, Piyushkumar A., Rajapakse, Jagath C.

Journal:

Journal of Biomedical Informatics

Year:

2015

Language:

english

File:

PDF, 1003 KB

english, 2015

12

Effects of the BET-inhibitor, RVX-208 on the HDL lipidome and glucose metabolism in individuals with prediabetes: A randomized controlled trial

Siebel, Andrew L., Trinh, Si Khiang, Formosa, Melissa F., Mundra, Piyushkumar A., Natoli, Alaina K., Reddy-luthmoodoo, Medini, Huynh, Kevin, Khan, Anmar A., Carey, Andrew L., van Hall, Gerrit, Cobelli

Journal:

Year:

2016

Language:

english

File:

PDF, 644 KB

english, 2016

13

Highly sensitive inference of time-delayed gene regulation by network deconvolution

Chen, Haifen, Mundra, Piyushkumar A, Zhao, Li Na, Lin, Feng, Zheng, Jie

Journal:

BMC Systems Biology

Year:

2014

Language:

english

File:

PDF, 1.86 MB

english, 2014

14

Lipidomic analyses in epidemiology

Mundra, Piyushkumar A., Shaw, Jonathan E., Meikle, Peter J.

Journal:

International Journal of Epidemiology

Year:

2016

Language:

english

File:

PDF, 598 KB

english, 2016

15

Lipidomic Profiling in Inflammatory Bowel Disease

Fan, Fenling, Mundra, Piyushkumar A., Fang, Lu, Galvin, Abby, Moore, Xiao Lei, Weir, Jacquelyn M., Wong, Gerard, White, David A., Chin-Dusting, Jaye, Sparrow, Miles P., Meikle, Peter J., Dart, Anthony

Journal:

Inflammatory Bowel Diseases

Year:

2015

Language:

english

File:

PDF, 125 KB

english, 2015

16

Plasma lipidomic profiling in patients with rheumatoid arthritis

Fang, Lu, Mundra, Piyushkumar A., Fan, Fenling, Galvin, Abby, Weir, Jacquelyn M., Wong, Gerard, Chin-Dusting, Jaye, Cicuttini, Flavia, Meikle, Peter, Dart, Anthony Michael

Journal:

Year:

2016

Language:

english

File:

PDF, 405 KB

english, 2016

17

Plasma Lipidomic Profiles Improve Upon Traditional Risk Factors for the Prediction of Cardiovascular Events in Type 2 Diabetes

Alshehry, Zahir H., Mundra, Piyushkumar A., Barlow, Christopher K., Mellett, Natalie A., Wong, Gerard, McConville, Malcolm J., Simes, John, Tonkin, Andrew M., Sullivan, David R., Barnes, Elizabeth H.,

Journal:

Year:

2016

Language:

english

File:

PDF, 3.71 MB

english, 2016

18

Markers of sympathetic nervous system activity associate with complex plasma lipids in metabolic syndrome subjects

Nestel, Paul J., Khan, Anmar A., Straznicky, Nora E., Mellett, Natalie A., Jayawardana, Kaushala, Mundra, Piyushkumar A., Lambert, Gavin W., Meikle, Peter J.

Journal:

Atherosclerosis

Year:

2017

Language:

english

File:

PDF, 274 KB

english, 2017

19

The association of the lipidomic profile with features of polycystic ovary syndrome

Moran, Lisa, Mundra, Piyushkumar, Teede, Helena, Miekle, Peter J

Journal:

Journal of Molecular Endocrinology

Year:

2017

Language:

english

File:

PDF, 1.44 MB

english, 2017

20

Plasma lipidomic profiles in two large independent cohorts improve upon conventional risk factors to predict cardiovascular events

Meikle, Peter, Mundra, Piyushkumar, Barlow, Christopher, Nestel, Paul, Barnes, Elizabeth, Kirby, Adrienne, Thompson, Peter, Sullivan, David, Alshehry, Zahir, Mellett, Natalie, Huynh, Kevin, Mcconville

Journal:

Atherosclerosis

Year:

2017

Language:

english

File:

PDF, 79 KB

english, 2017

21

Muscle Sympathetic Nerve Activity Is Associated With Elements of the Plasma Lipidomic Profile in Young Asian Adults

Eikelis, Nina, Lambert, Elisabeth A., Phillips, Sarah, Sari, Carolina Ika, Mundra, Piyushkumar A., Weir, Jacquelyn M., Huynh, Kevin, Grima, Mariee T., Straznicky, Nora E., Dixon, John B., Schlaich, Ma

Journal:

Journal of Clinical Endocrinology & Metabolism

Year:

2017

Language:

english

File:

PDF, 388 KB

english, 2017

22

Lipidomic profiling of plasma in a healthy Singaporean population to identify ethnic specific differences in lipid levels and associations with disease risk factors

Begum, Husna, Torta, Federico, Narayanaswamy, Pradeep, Mundra, Piyushkumar A., Ji, Shanshan, Bendt, Anne K., Saw, Woei-Yuh, Teo, Yik Ying, Soong, Richie, Little, Peter F., Meikle, Peter J., Wenk, Mark

Journal:

Clinical Mass Spectrometry

Year:

2017

Language:

english

File:

PDF, 1.58 MB

english, 2017

23

Weight Loss and Exercise Alter the High-Density Lipoprotein Lipidome and Improve High-Density Lipoprotein Functionality in Metabolic Syndrome

Khan, Anmar A., Mundra, Piyushkumar A., Straznicky, Nora E., Nestel, Paul J., Wong, Gerard, Tan, Ricardo, Huynh, Kevin, Ng, Theodore W., Mellett, Natalie A., Weir, Jacquelyn M., Barlow, Christopher K.

Journal:

Arteriosclerosis Thrombosis and Vascular Biology

Year:

2017

Language:

english

File:

PDF, 3.39 MB

english, 2017

24

Circulating Lipids Are Associated with Alcoholic Liver Cirrhosis and Represent Potential Biomarkers for Risk Assessment

Meikle, Peter J., Mundra, Piyushkumar A., Wong, Gerard, Rahman, Khairunnessa, Huynh, Kevin, Barlow, Christopher K., Duly, Alastair M. P., Haber, Paul S., Whitfield, John B., Seth, Devanshi, Sookoian,

Journal:

Year:

2015

Language:

english

File:

PDF, 775 KB

english, 2015

25

Changes in plasma lipidome following initiation of antiretroviral therapy

Trevillyan, Janine M., Wong, Gerard, Puls, Rebekah, Petoumenos, Kathy, Emery, Sean, Mellett, Natalie A., Mundra, Piyushkumar A., Meikle, Peter J., Hoy, Jennifer F., Fitzgerald, Michael L.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.28 MB

english, 2018

26

Large-scale plasma lipidomic profiling identifies lipids that predict cardiovascular events in secondary prevention

Mundra, Piyushkumar A., Barlow, Christopher K., Nestel, Paul J., Barnes, Elizabeth H., Kirby, Adrienne, Thompson, Peter, Sullivan, David R., Alshehry, Zahir H., Mellett, Natalie A., Huynh, Kevin, Jaya

Journal:

Year:

2018

Language:

english

File:

PDF, 974 KB

english, 2018

27

Ultraviolet radiation–induced DNA damage is prognostic for outcome in melanoma

Trucco, Lucas D., Mundra, Piyushkumar A., Hogan, Kate, Garcia-Martinez, Pablo, Viros, Amaya, Mandal, Amit K., Macagno, Nicolas, Gaudy-Marqueste, Caroline, Allan, Donald, Baenke, Franziska, Cook, Marti

Journal:

Nature Medicine

Year:

2018

Language:

english

File:

PDF, 8.21 MB

english, 2018

28

Publisher Correction: Ultraviolet radiation–induced DNA damage is prognostic for outcome in melanoma

Trucco, Lucas D., Mundra, Piyushkumar A., Hogan, Kate, Garcia-Martinez, Pablo, Viros, Amaya, Mandal, Amit K., Macagno, Nicolas, Gaudy-Marqueste, Caroline, Allan, Donald, Baenke, Franziska, Cook, Marti

Journal:

Nature Medicine

Year:

2018

File:

PDF, 497 KB

2018

29

Stroma remodeling and reduced cell division define durable response to PD-1 blockade in melanoma

Galvani, Elena, Mundra, Piyushkumar A., Valpione, Sara, Garcia-Martinez, Pablo, Smith, Matthew, Greenall, Jonathan, Thakur, Rohit, Helmink, Beth, Andrews, Miles C., Boon, Louis, Chester, Christopher,

Journal:

Nature Communications

Year:

2020

File:

PDF, 1.03 MB

2020

30

Map3k1 Loss Cooperates With Braf to Drive Melanomagenesis

Trucco, Lucas D., Mundra, Piyushkumar A., GarcÃa-MartÃnez, Pablo, Hogan, Kate, Baenke, Franziska, Dhomen, Nathalie, Pavet, Valeria, Marais, Richard

Journal:

The Journal of Investigative Dermatology

Year:

2020

File:

PDF, 27.26 MB

2020

31

Brain microenvironment-driven resistance to immune and targeted therapies in acral melanoma

Lee, Rebecca Jane, Khandelwal, Garima, Baenke, Franziska, Cannistraci, Alessio, Macleod, Kenneth, Mundra, Piyushkumar, Ashton, Garry, Mandal, Amit, Viros, Amaya, Gremel, Gabriela, Galvani, Elena, Smit

Journal:

Year:

2020

File:

PDF, 2.10 MB

2020

32

Ensemble learning models that predict surface protein abundance from single-cell multimodal omics data

Xu, Fan, Wang, Shike, Dai, Xinnan, Mundra, Piyushkumar A., Zheng, Jie

Journal:

Year:

2020

File:

PDF, 2.20 MB

2020